Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGANLFELENFVAREVDVAPAASGAPHAAGGRL
3QD8 Chain:A ((10-181))
---------KFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGANLFELENFVAREVDVAPAASGAPHAAGGRL
General information:
TITO was launched using:
RESULT:
Template:
3QD8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67624 for 1348 contacts (-50.2/contact) +
2D Compatibility (PS) -18878 + (NN) -13253 + (LL) 364
1D Compatibility (HY) -22800 + (ID) 8600
Total energy: -130791.0 ( -97.03 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_3QD8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QD8-query.scw
PDB file :
Tito_Scwrl_3QD8.pdb
: