Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLTRVSVTAVRNLHPVTLSPSPRINILYGDNGSGKTSVLEAIHLLGLARSFRSARLQPVIQYEEAACTVFGQVMLANGIA-SNLGISRERQGEFTIRIDGQNARSAAQLAETLP---LQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPVWQRLQKALRQRNSWLRHGKLDPASQAAWDRELSLASDEIDAYRRSYIQALKPVFEETLAELVSLDDLTLSYYRGWDKDR---DLLEVLASSLLRDQQMGHTQAGPQRADLRIRLAGHNAAEILSRGQQKLVVCALRIAQGHLINRAKRGQ-CVYLVDDLPSELDEQHRMALCRLLEDLGCQVFITCVDPQLLKDGWRTDTPVSMFHVEHGKVSQTTTIGSEA |
| 2O5V Chain:A ((6-329)) | --LSALSTLNYRNLAPGTLNFPEGVTGIYGENGAGKTNLLEAAYL-ALTGQTDAPRIEQLIQAGETEAYVRADLQQGGSLSIQEVGLGRGRR---QLKVDGVRARTG-----DLPRGGAVWIRPEDSELVFGPPSGRRAYLDSLLSRLSARYGEQLSRYERTVSQRNAALRGG--EEWAMHVWDDVLLKLGTEIMLFRRRALTRLDELAREANAQLGSRKTLALTLTESTSPETYAADLRGRRAEELAR----GSTVTGPHRDDLLLTLGDFPASDYASRGEGRTVALALRRAELELL-REKFGEDPVLLLDDFTAELDPHRRQYLLDLAASV-PQAIVTGTELAPGAALTLRAQAGRFTPVADEEMQAEGTA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156107 for 2482 contacts (-62.9/contact) +
2D Compatibility (PS) -34279 + (NN) -20066 + (LL) 1800
1D Compatibility (HY) -11600 + (ID) 5150
Total energy: -225402.0 ( -90.81 by residue)
QMean score : 0.488
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