Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPDLTQLPTGSVVTGQVQDLPIDAPILQMEVVRVDAEGVGLRFLSEA
4Q9D Chain:A ((85-122))-----------LVAAYRANTPLIITAGQQTREMSVVDPYLNNPDATTMPKPWVKWSYEPARAEDVPAAFMQAYAVAMQPPMGPVFLSI


General information:
TITO was launched using:
RESULT:

Template: 4Q9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1419 for 154 contacts (-9.2/contact) +
2D Compatibility (PS) -3834 + (NN) -1264 + (LL) 356
1D Compatibility (HY) -800 + (ID) 650
Total energy: -7611.0 ( -49.42 by residue)
QMean score : -0.032

(partial model without unconserved sides chains):
PDB file : Tito_4Q9D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q9D-query.scw
PDB file : Tito_Scwrl_4Q9D.pdb: