Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA
1IX1 Chain:A ((2-168))
-AILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA
General information:
TITO was launched using:
RESULT:
Template:
1IX1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67037 for 1276 contacts (-52.5/contact) +
2D Compatibility (PS) -17790 + (NN) -3258 + (LL) 208
1D Compatibility (HY) -23600 + (ID) 8350
Total energy: -119827.0 ( -93.91 by residue)
QMean score : 0.722
(partial model without unconserved sides chains):
PDB file :
Tito_1IX1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IX1-query.scw
PDB file :
Tito_Scwrl_1IX1.pdb
: