Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAVYRLLALKARPVEKGLIVVAANIHQLDFLLED--LPDVWLDRLAGTWPGPNTWLVPHQERLPEWVTGVHDSVAVRVTDHPLVQELCHLTG-PLISTSANPAGRPAARTRLRVEQYFHDELDAILGGALGGRRNPSLIRDLVTGQVIRPA
1HRU Chain:A ((13-188))
---------AIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDVQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAF-PVVPGETGGRLNPSEIRDALTGELFR--
General information:
TITO was launched using:
RESULT:
Template:
1HRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125366 for 1384 contacts (-90.6/contact) +
2D Compatibility (PS) -18743 + (NN) -12708 + (LL) 836
1D Compatibility (HY) -15200 + (ID) 4600
Total energy: -175781.0 ( -127.01 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_1HRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HRU-query.scw
PDB file :
Tito_Scwrl_1HRU.pdb
: