Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRWLGVALGCSGLAIALACAGVLLAPADMAASSSSPSPARTVAALPAVDDRPP-PPAPVRSQAAAPAYEA-----EPPVAELDREQAIQFMQMLRDEGDPRSPPLGGLQ---PRQGATAQELADPKQY---------QAFEERQTRELVQAYTSGVQQIPEIRARIEAAEQGGERSAEEIDEARAALGQLEMMRDKLQRESPQLLPGDSAPTSPAAP |
| 3SKV Chain:A ((267-375)) | --------------------------------------PANLVGFVQIIRERHPLTPIVLGSSVYSPFWDELPADDKPTVADY-REQVVKVAELLRKHGDQNVHYLDGMRVWGPERGMELY-LEKPDKYPTHPNAVGHEIFAESSRREMAALGVLPVR------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2336 for 482 contacts (4.8/contact) +
2D Compatibility (PS) -10139 + (NN) -9534 + (LL) 7244
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -17943.0 ( -37.23 by residue)
QMean score : 0.426
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