Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYG-QGFEHLYYLLEAAVAGLGVAIAPEPLVRDDLAAGRLAAPWGFIETDARLALWVP---ARLHDPRAGRLAQWLREQLAG |
3KOT Chain:A ((11-203)) | -------------------------------------------------------------------------------------------QEK-LKIGVVGVFAIGCLFPLLSDFKRSYPHIDLHISTHNNRVDPAAEGLDYTIRYGGGAW-HDTDAQYLCSALMSPLCSPTLASQI---QTP-ADILKFPLLRSYRRDE-WALWMQTVGEAPPSPTHNVMVFDSAVTMLEAAQAGMGVAIAPVRMFTHLLSSERIVQP--FLTQIDLGSFWITRLQSRPETPAMREFSRWLTGVLH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KOT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118594 for 1473 contacts (-80.5/contact) +
2D Compatibility (PS) -19634 + (NN) -2422 + (LL) 6880
1D Compatibility (HY) -13200 + (ID) 2950
Total energy: -149920.0 ( -101.78 by residue)
QMean score : 0.455
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