Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYG-QGFEHLYYLLEAAVAGLGVAIAPEPLVRDDLAAGRLAAPWGFIETDARLALWVP---ARLHDPRAGRLAQWLREQLAG
3KOT Chain:A ((11-203))-------------------------------------------------------------------------------------------QEK-LKIGVVGVFAIGCLFPLLSDFKRSYPHIDLHISTHNNRVDPAAEGLDYTIRYGGGAW-HDTDAQYLCSALMSPLCSPTLASQI---QTP-ADILKFPLLRSYRRDE-WALWMQTVGEAPPSPTHNVMVFDSAVTMLEAAQAGMGVAIAPVRMFTHLLSSERIVQP--FLTQIDLGSFWITRLQSRPETPAMREFSRWLTGVLH-


General information:
TITO was launched using:
RESULT:

Template: 3KOT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118594 for 1473 contacts (-80.5/contact) +
2D Compatibility (PS) -19634 + (NN) -2422 + (LL) 6880
1D Compatibility (HY) -13200 + (ID) 2950
Total energy: -149920.0 ( -101.78 by residue)
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_3KOT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KOT-query.scw
PDB file : Tito_Scwrl_3KOT.pdb: