Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKI----KANGVPAYTLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG
4NK3 Chain:A ((7-40))----------------------APADRLKALVDAAVQPVMKANDIPGLAVAISLKGEPHYFSYGLASKEDGRRVTPETL


General information:
TITO was launched using:
RESULT:

Template: 4NK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4725 for 100 contacts (-47.2/contact) +
2D Compatibility (PS) -3472 + (NN) -3115 + (LL) 2552
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -11410.0 ( -114.10 by residue)
QMean score : 0.747

(partial model without unconserved sides chains):
PDB file : Tito_4NK3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NK3-query.scw
PDB file : Tito_Scwrl_4NK3.pdb: