Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVLALRLTALAALVISVSGCVMEAYGSRARSDAQSWIGLPIQDVIKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTANQSGYYTCIYEFFADASGRVVDATARGECR |
3VQ1 Chain:C ((75-120)) | ------------------------------------------------------------------KEVLCHGHDDDYSFCRALKGETVNTSIPFSFEGILFPKGHYRCVAEAIAGDTEEKLFCLNFTIIH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3076 for 145 contacts (21.2/contact) +
2D Compatibility (PS) -4919 + (NN) -1588 + (LL) 5468
1D Compatibility (HY) -1200 + (ID) 750
Total energy: 87.0 ( 0.60 by residue)
QMean score : 0.233
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