Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHCFANGNKRTAAAAATVFLLLNGIELTGPAQDFVDIMVALVTREASVQDLEDWMFYWHRPFDAYNLPDSDAFERMVARLGIG
3K33 Chain:A ((66-118))
--HIFNDANKRTALNSALLFLRRNGVQVF-DSPELADLTVGAATGEISVSSVADTLRRLYGS----------------------
General information:
TITO was launched using:
RESULT:
Template:
3K33.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21651 for 282 contacts (-76.8/contact) +
2D Compatibility (PS) -5902 + (NN) -3251 + (LL) 1288
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -32866.0 ( -116.55 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_3K33.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K33-query.scw
PDB file :
Tito_Scwrl_3K33.pdb
: