Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPLTRLVPLALLLLAGCAGPLPQPDPQMAWVELRSAPANTLLAERLDGERLSDGR--YFQVTPGRHVLEVRFQYELYGGSGGGGGGFGEPVQINCYQQVVYDGFEAGRRYRLEVRPQLRRALALLSDERGEVVARSNFQTSRCPPY |
1P49 Chain:A ((307-341)) | ----------------------------------------------LDELRLANDTLIYFTSDQGAHVEEVSSKGEIHGGSNGIYKGGKANNWEGGIRVPGILRWPRVIQAGQKIDEPTSNMDIFPTVAKLAGAPLPEDRIIDGRDL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1P49.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 138 for 107 contacts (1.3/contact) +
2D Compatibility (PS) -3363 + (NN) 19 + (LL) 3400
1D Compatibility (HY) 3200 + (ID) 0
Total energy: 3394.0 ( 31.72 by residue)
QMean score : -0.178
|
|
|