Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNPFATPTAPVQPPAREVPATTQPYAFIAVLALVTCLSFAVSLGIQWYNDIGEIRQRFSEHLQLMAPHWFTGLVFYAAANLLVLHAYREKRQLVEFRPLALLLIGYGLLNLVCGMLAGIGLAPLTLPFYQWVTAQSSYGVWLMAFNEAMSWVYLLLGSLLPL-GLVLLGSRVNSPRLAEGEEARVAAWQVALGAALCFATLCFKLMQFLPYALLRYDEPWLYGLYLSGVALPAALLFGAVCTRLPARLQRFAAGRALLLAVVAMLLWSVALLAVGGGLALLMILGLAPAGIGYTLLVALLGVGLLALLWPIGRLATRWCYADQLAA |
| 2PQS Chain:A ((34-95)) | -------------------------------------------------------------------------------------------------------------------------------FPYYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGAR------DFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFETPFQARFVRIQPVAWHNRITLRVELLGC---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24676 for 257 contacts (-96.0/contact) +
2D Compatibility (PS) -6337 + (NN) 2554 + (LL) 17720
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -13739.0 ( -53.46 by residue)
QMean score : -0.188
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