Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDAALRYPNILFDLDGTLTDPREGITRSVQFALARLGIDEPDLARLEHFIGPPLLQCFMQTYGFDEARAWEAVNHYRERFRVTGLYENRVFDGIPELLEALVGRGHTLYVATSKPGVFAREIARHFAFDRHFKAIYGSELDGTRTHKEELIRHLLDSEGLA-AEHCLMIGDRMHDLLGASRNGVACIGVGYGFGSEDELRAHQPTHYCADLAALRQVLESH
3SD7 Chain:A ((28-239))
------NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKE-DLENLDQFIGPPLHDTFKEYYKFEDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDILL--
General information:
TITO was launched using:
RESULT:
Template:
3SD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162489 for 1765 contacts (-92.1/contact) +
2D Compatibility (PS) -23352 + (NN) -13090 + (LL) 632
1D Compatibility (HY) -23200 + (ID) 4950
Total energy: -226449.0 ( -128.30 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_3SD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SD7-query.scw
PDB file :
Tito_Scwrl_3SD7.pdb
: