Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDELGAAWLDAYLTSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLGGLVGGDDGWFEQVESLLLSTLEPEAEVEAFEQAVAQLPAPPCGPRIEQSLISGNLLRSEAVTPAQRLAALAQHACDGASHWWGRGSARISAGLMRYQGLPPAPAFGRFLTGEGEVIPLFPGIPG |
| 4LIM Chain:A ((294-325)) | ----------------------------------------------------------------------------------------------------------------ECKEDLVLMTLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPIDESFAPEKAPKLIDLQTEMEKNNDVSLTALQPFINQFQAYVSSLLKNELGS------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -651 for 102 contacts (-6.4/contact) +
2D Compatibility (PS) -3142 + (NN) -1915 + (LL) 6536
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -2272.0 ( -22.27 by residue)
QMean score : 0.280
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