Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSTTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPQAAVADRKFLEIDVDNFDARLKAMKPRVAFNVPNVLTGEGNLSLDITFESMDDFSPAAVARKVDSLNKLLEARTQLANLLTYMDGKTGAEEMIMKAIKDPALLQALASAPKPKDDEPQA |
| 4UQZ Chain:B ((8-31)) | -------QKFIARNRAPRVQIEYDVELYGAE--------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 664 for 54 contacts (12.3/contact) +
2D Compatibility (PS) -2368 + (NN) 1461 + (LL) 9956
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: 5313.0 ( 98.39 by residue)
QMean score : 0.267
|
|
|