Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADPSFASGRLGSRLQGSIAMIAEELLRAGRLDDALKALQEQVRSQPSNATLRIFLFQLLAVMGQWARAQNQLKVVGELDASALPMVQTYSTAIDCEALRREVFAGRLTPVILGQPAEWIAPLLQALSLDAEGHGEAAQALREQAFDAAPAVPGRIGEAPFAWLADADTRLGPVLEVIVNGRYAWLPMSNLRSLKVEAPSDLRDLVWLPAELTLANGGATVALLPARYAETVEHGDDAARLGRKTEWLDSGLPVGQRLFVTDAGETALFDLRELDFEPTDA
4UQZ Chain:A ((2-259))
---------------------IAEELLRAGRLDDALKALQEQVRSQPSNATLRIFLFQLLAVMGQWARAQNQLKVVGELDASALPMVQTYSTAIDCEALRREVFAGRLTPVILGQPAEWIAPLLQALSLDAEGHGEAAQALREQAFDAAPAVPGRIGEAPFAWLADADTRLGPVLEVIVNGRYAWLPMSNLRSLKVEAPSDLRDLVWLPAELTLANGGATVALLPARYAETVEHGDDAARLGRKTEWLDSGLPVGQRLFVTDAGETALFDLRELDFEPT--
General information:
TITO was launched using:
RESULT:
Template:
4UQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140242 for 2084 contacts (-67.3/contact) +
2D Compatibility (PS) -28933 + (NN) -16696 + (LL) 1080
1D Compatibility (HY) -34000 + (ID) 12900
Total energy: -231691.0 ( -111.18 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_4UQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UQZ-query.scw
PDB file :
Tito_Scwrl_4UQZ.pdb
: