Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGFEARTQQGAALRPTSHFVYESIYTAILEKRLAPAAKLSKETLGQIFRVSNGTIQRALTRLAEDGAVVMPPKEVASVARPDERQARQVLDARLLVESEVVRQL-PAGLDPAALAELRALVDEEQACLAARDSAGLIRLAGRFHLRLAELTENPLLQGFVRGLVARASLDIALNKGAV-YTAEACAAQRALLDALEDGDSAAAAALMDAYLRGLFARMRFLPPPTTDLREAFGMKAPSGEKRRRA
2HS5 Chain:A ((40-221))
---------------------------AIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGFDPATGDLSRVAEALDLADER---YAVEDWTGVGTADIHFHSALASLNNSNRIDELMRSVWNEARLVFHVMDDAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR----------------------
General information:
TITO was launched using:
RESULT:
Template:
2HS5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70460 for 1307 contacts (-53.9/contact) +
2D Compatibility (PS) -20080 + (NN) -14231 + (LL) 3668
1D Compatibility (HY) -11200 + (ID) 2450
Total energy: -114753.0 ( -87.80 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_2HS5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HS5-query.scw
PDB file :
Tito_Scwrl_2HS5.pdb
: