Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKWTRKAAADLDAIYDHYVVLIGPEKALKAVQDIVEQVKPLQQVANQGAGRPSEVPGVRTLTLERWPFSAPFRVKGKEIQILRIDRVEITP
3BNW Chain:A ((30-76))
-------------------------PTANIGLDKDVMECLQPYKNLVVYGWGTVSQVPGKERESFGPYPFAASIGFNTLTVEPYFLHEFGWDF
General information:
TITO was launched using:
RESULT:
Template:
3BNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3237 for 186 contacts (-17.4/contact) +
2D Compatibility (PS) -4505 + (NN) -926 + (LL) 2340
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -9778.0 ( -52.57 by residue)
QMean score : 0.025
(partial model without unconserved sides chains):
PDB file :
Tito_3BNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BNW-query.scw
PDB file :
Tito_Scwrl_3BNW.pdb
: