Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTVVSFRADDALVAALDELARATHRDRPYHLRQALAQYLERQQWQVAAIDEGLADANAGRLLEHIEIEKRWGLQ
1YVL Chain:A ((27-65))----------------------------PMEIRQYLAQWLEKQDWEHAANDVSFATIRFHDLLSQLDDQYSRFSL


General information:
TITO was launched using:
RESULT:

Template: 1YVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8147 for 201 contacts (-40.5/contact) +
2D Compatibility (PS) -4454 + (NN) -3788 + (LL) 2600
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -17789.0 ( -88.50 by residue)
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_1YVL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YVL-query.scw
PDB file : Tito_Scwrl_1YVL.pdb: