Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVVLASQLPNKRNASLAPGLKQRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAALLAYLIAGTLVVLVMRMLGEMAVASPDTGSFSTYADRSIGRWAGFTIGWLYWW-FWVLVIPLEAIAAAAILNAWFPAI-DTWIFAL---AVTFLLTVTNLFSVARYGEFEFWFALLKVIAIIAFIVLGAVAIVGGLPEREVSGLSSLMASHGGFVPNGYGAVLGALLTTMFSFMGTEIVTIAAAESKDPAKQITRATNSVIWRIGLFYLVSIFIVISIVPWNDPLLIQVGSYQRALELLDIPHAKLIVDLVVLVAVASCLNSA---IYTSSRMVFSLAKRGDAPSVLKLTNTAHVPRPAVLASTAVGFLTTIVNY--FAPEKVFTFLLASSGAV--ALLVYLVIAVAQLRMRKQLQASGQP----IEFRMWLYPWLTWAVILFIVAALSIMLIMPEHRHEVFATALLTIFTVCLGLLNARRKPRLGEDYAGKTARV |
| 3NCY Chain:A ((15-403)) | --------------------------VTLMVSGNIMGSGVFLLPAN-LAATGGIAIYGWLVTIIGALALSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVG-YLSYFFPILKDPLVLTLTCVAVLWIFVLLNIVGPKMITRVQAVATVLALVPIVGIAVFGWFWFKGE---WNVSGM------------NTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIP-NAALRVSASPFGDAARMALGDTAGAIVS---FCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFAR-----TPVAGLL---IVGVLMTIFQFSSMSPNAAKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPLYLLITFVAFVY--CIWAVIGSGAKEVMWSFVTLMVITALYALNYNRIHKNPYPLDAP----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -357141 for 3171 contacts (-112.6/contact) +
2D Compatibility (PS) -36664 + (NN) -7569 + (LL) 5824
1D Compatibility (HY) -32400 + (ID) 4850
Total energy: -432800.0 ( -136.49 by residue)
QMean score : 0.308
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