Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKSRNPSLGQVSDFDIRLLRIFKTIVECGSFSAAESTLGLSRSAISLHMGDLEKRLGMRLCQRGRAGFALTDEGREVYRATQTLLAALEGFRAEVNDLHQHLRGELNIGIINNLVTLPQMRITHALSALKGQG----PQVRINIGMTTPNEIELGVLDGHLHVGVVPLISPLSGLEYLPLYDEHAQLYCSRGHALFERADGDIAVDEVLAADAVAPSYRLPA--------EAQARHQELNNSASASDREGMAFLILTGNFIGYLPSHYAADWVAAGMLRPLLPERFHYAIALTIVTRKGRRPNLVLERFLEAVAVS |
3HHG Chain:A ((8-260)) | -------------------LTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVD-----SAMPM--VLHLLAPLAAKFNERYPHIRLSL---VSSEGYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYL---AKHGTPQSTEELAGHQCL-GFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109029 for 1579 contacts (-69.0/contact) +
2D Compatibility (PS) -25138 + (NN) 98 + (LL) 2080
1D Compatibility (HY) -15600 + (ID) 3250
Total energy: -150839.0 ( -95.53 by residue)
QMean score : 0.251
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