Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSNGSSSRRTFLRLAALLLPAGALLGSLPGVRAAARPRKLYLAGPDVFRAD-AVAHGEALKALCARYGFEGLYPLDNALPKQLAEPREQAAWIYRANIGLIERADAVLANLNFFRGAEPDSGTAFEVGYATALGKPVYGYVDDAGSYAERIRRHAPELIGEDPTRDRDGMTLEEFGLPLNLMLAVPATLVVGDAEQALRQLASRRHG
2A0K Chain:A ((10-137))
---------------------------------------RKIYIAGPAVFNPDMGASYYNKVRELLKKENVMPLIPTDNEATEALD--------IRQKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFTSD--------RRNMREKYGS--GVDKDNLRVEGFGLPFNLMLYDGVEVFDSFESAFKYFLANFPS-
General information:
TITO was launched using:
RESULT:
Template:
2A0K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32612 for 885 contacts (-36.8/contact) +
2D Compatibility (PS) -13413 + (NN) -7769 + (LL) 3492
1D Compatibility (HY) -11200 + (ID) 2900
Total energy: -64402.0 ( -72.77 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2A0K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A0K-query.scw
PDB file :
Tito_Scwrl_2A0K.pdb
: