Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSLQSPSDASARNDLVYGLDDRPSAPIALLAALQHLLAIIVPIVTPGLLICQALGVSPRDTNLIVSMSLVISGIATFVQ---CKRFGPFGAGLLIVQGTSFNFVGPLIAGGALMVKQGTPVESVMAAIFGVVIAGSFVEMGISRILP-----FVKRLITPLVTGIVVLMIGLTLIKVGLISMGGGFSAMSNGTFANGENLLLSGVVLGIIVVLNRIPVVWMRSCAIVIALAVGYALAGYLGRLDFTGMHQAELFQVPTPLHFGLDFSWPLFIPMLVIYLVTSLEAIGDVTATSKVSKQPVEGPLWMQRIKGGVLVNGANSFLAGIFNTFPSSVFAQNNGVIQLTGVASRYVGLWIAAMLVLLGLFPSVAGVIQAVPEPVLGGAAMVMFGAVAASGINILAGIQLD-RRALLIIAVSLALGLGVSQVPEFLAHMPAALRNVLESGVATGGICALLLNWFLPESPVQKAGH |
| 3QE7 Chain:A ((7-378)) | ------------------GVSERPPLLQTIPLSLQHLFAMFGATV----LVPVLFHINP-------ATVLLFNGIGTLLYLFICK--GKIPAYL----GSSFAFISPVL----LLLPLGYEV-----ALGGFIMCGVLFCL-VSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVA-AGMAGLLPA--EGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPT--LYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHR---SMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIFKLIS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -347079 for 3109 contacts (-111.6/contact) +
2D Compatibility (PS) -37105 + (NN) -8790 + (LL) 4432
1D Compatibility (HY) -35200 + (ID) 5500
Total energy: -429242.0 ( -138.06 by residue)
QMean score : 0.314
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