Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKITDDCINCDVCEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDDANVESKDQLMEKYRKITGKA
2FGO Chain:A ((1-81))
-SLKITDDCINCDVCEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDDANVESKDQLMEKYRKITGK-
General information:
TITO was launched using:
RESULT:
Template:
2FGO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31115 for 567 contacts (-54.9/contact) +
2D Compatibility (PS) -9064 + (NN) -11470 + (LL) 352
1D Compatibility (HY) -12000 + (ID) 4050
Total energy: -67347.0 ( -118.78 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_2FGO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FGO-query.scw
PDB file :
Tito_Scwrl_2FGO.pdb
: