Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPFAIAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKYGVSAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRSLQLIRDGGCKAGLVFNPATPLEVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGGVNVKNIREIAAAGADTFVAGSAIFNAPDYAEVIRAMHAELAQAHQ
3INP Chain:A ((27-245))
--HIQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGF--QKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELNKV--
General information:
TITO was launched using:
RESULT:
Template:
3INP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -213520 for 1838 contacts (-116.2/contact) +
2D Compatibility (PS) -23758 + (NN) -9339 + (LL) 172
1D Compatibility (HY) -25200 + (ID) 6900
Total energy: -278545.0 ( -151.55 by residue)
QMean score : 0.779
(partial model without unconserved sides chains):
PDB file :
Tito_3INP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3INP-query.scw
PDB file :
Tito_Scwrl_3INP.pdb
: