Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFFLRYAYAPLFWSGFIGLATWQVGYRQASHAWLVALFLGALGLSFLAERRLPYQPRWNRPHADRLRDVLHASVNESLNALGILALPLLAGVLGFWPVWPQAWPLWLQLLLAIVLADLGITLVHYASHRSALLWRLHAVHHSVQRLYGFNGLMKHPLHLGLEALGGTLPLLLLGVPQTVAALLAFAIGIQLLLQHSNVDMRIGGLRHVF-AWAPLHRLHHIRYGRAGDVNFALFFSVWDRLLGTALHRPDYRLDSTDMGIGDQPDYPRDYAGQLLAPFRDLPRSRHVPQPPEGLGRSAGQA |
3QAZ Chain:B ((109-199)) | ------------------------------------------------------------------------------------------------------------------LMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEA-----PLLTLKQKQEWICLETLTPDTQYEFQ-----VRVKPLQGEFTTWSPWSQPLAFRTKP---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QAZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62249 for 539 contacts (-115.5/contact) +
2D Compatibility (PS) -8767 + (NN) 4442 + (LL) 13440
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -58834.0 ( -109.15 by residue)
QMean score : -0.129
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