Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQDERAAAALELTHNWDRDGYTQGDGYGHLAIEVEDAAVTCARARALGYRVTREAGLMQHGRSVIAFLEDPDGYKVELIQKGTQFD
4MTQ Chain:A ((1-128))
MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQDERAAAALELTHNWDRDGYTQGDGYGHLAIEVEDAAVTCARARALGYRVTR----------VIAFLEDPDGYKVELIQKGT---
General information:
TITO was launched using:
RESULT:
Template:
4MTQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62454 for 801 contacts (-78.0/contact) +
2D Compatibility (PS) -12620 + (NN) -5315 + (LL) 700
1D Compatibility (HY) -16400 + (ID) 5900
Total energy: -101989.0 ( -127.33 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_4MTQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MTQ-query.scw
PDB file :
Tito_Scwrl_4MTQ.pdb
: