Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA
3LT5 Chain:A ((1-212))
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESG--SFEDSCDEAEQRLLALARSA
General information:
TITO was launched using:
RESULT:
Template:
3LT5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122223 for 1642 contacts (-74.4/contact) +
2D Compatibility (PS) -23680 + (NN) -16306 + (LL) -72
1D Compatibility (HY) -26800 + (ID) 10500
Total energy: -199581.0 ( -121.55 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_3LT5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LT5-query.scw
PDB file :
Tito_Scwrl_3LT5.pdb
: