Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAPVEALFQPFRLG-ALELPTRVVMAPMTRNFSPGG-VPNAKVVEYYRRRAAAGVGLIVSEGTTVGHKAANGYPNVPRFYGEDALAGWKQVVDAVHAEGGRIVPQLWHVGSVRRLGVEPDASVPGYGPMEKAKDGKV-----LVHGMSKA----DIQEVIAAFAQAARDAQAIGMDGVEIHGAHGYLIDQFFWEGSNQRDDEYGGSLANRSRFAVELVRAVRAAVGADFPIIFRFSQWKQQDYSARLVETPEGLREFLAPLVEAGVDIFHCSTRRFWIPEFEGSELNLAGWTRELTGKPTITVGNVGLDGSEFLQ-FFGKTDEVAQPASIDGLVERLDKGEFDLVAVGRALLVDPEWAVKVREGRIGDIKPFSREALASLV |
| 4B5N Chain:A ((10-355)) | ----VENLFDTYKLNDTITLKNRILMAPLTRCMADANLVPTDDMVAYYARRAEAG--LIISEATII-RPDAQGYPNTPGIFTQAQIAGWRKVTDAVHANGGKIFVQLWHTGRVAHPHFFGGGDV--LAPSAQKIEGSVPRMRELTYVTPKAVTVEDIQGLVRDYAKAAENVIEAGFDGVEIHGANGYLIDQFLHHDSNRRTDEYGGTPVNMSRFALEVVDAIIARIGHD----------------------RTGLRISPGAYFNMASDSRDRVVFDYLLPELEKRDL---AFVHIGIFDDSIEFDYLGGTASSYVRAHYGKTLVGVGSYSAETASKAIAEDKFDLIAIGRPFIANPDYVAKVRNSE--ELVAYSDEMLASLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123151 for 3020 contacts (-40.8/contact) +
2D Compatibility (PS) -35667 + (NN) -9839 + (LL) 2064
1D Compatibility (HY) -24400 + (ID) 6500
Total energy: -197493.0 ( -65.40 by residue)
QMean score : 0.533
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