Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIREILKMGDERLLRIAQPVPSELFGSEELQRLIDDMFETMHHVGGVGLAAPQIGVDLQLVIFGFERSERYPDAPAVPPTILLNPRVTPLDDEMEEGWEGCLSVPGLRGAVSRHRRIRYQGLDPQDSRSTAASKGSMRGWCSTSATT
3DLD Chain:A ((1-125))
MIRDIIRMGDKRLLRVAPQVTN--LGSAELHALVSDMFETMGAAHGVGLAAPQIAVDLQLMVFGFEASERYPEAPAVPLTALANAQIEPLSDEMENGWEGCLSIPGLRAVIPRYRYIRYRGFAPDGSPIEREAEGFHARVVQHEYDH
General information:
TITO was launched using:
RESULT:
Template:
3DLD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58059 for 815 contacts (-71.2/contact) +
2D Compatibility (PS) -13510 + (NN) -10868 + (LL) 280
1D Compatibility (HY) -15200 + (ID) 4000
Total energy: -101357.0 ( -124.36 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_3DLD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DLD-query.scw
PDB file :
Tito_Scwrl_3DLD.pdb
: