Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADREVGTVKWFNDAKGYGFIQRDSGPDVFVHYRAIRGEGHRSLVEGQKVEFSVIQGQKGLQAEDVSKV
1HZA Chain:A ((4-65))
------GKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVTKE
General information:
TITO was launched using:
RESULT:
Template:
1HZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33055 for 399 contacts (-82.8/contact) +
2D Compatibility (PS) -6551 + (NN) -563 + (LL) 672
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -47297.0 ( -118.54 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_1HZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HZA-query.scw
PDB file :
Tito_Scwrl_1HZA.pdb
: