Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQKRILVTGAGSGFGREVALRLAA---RGHRTIAGVRGAGQAADLREEAGRRGVP---LRVETLDI----TVAADRERAWEWDIDVLLNNAGSAEAGASAEIPLELVRALFETNVFANLELTQGFVRRMVEQKRG-GKVLFVSSIAGLITGPYTGPYCASKHALEAFAEALHAELKPFGIQVGTINPGPYQTGFNDRMM------------ETWKRWYDPQRHFTDHSGVRFPFEQYDPEEMIARMVELAEADEGPFRTLLPQAFVEVVKDEQAQAWQRRL |
| 1IOL Chain:A ((5-264)) | -----VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLEVNVVGTVRMLQAFLPDM--KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFY----QYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IOL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95985 for 1869 contacts (-51.4/contact) +
2D Compatibility (PS) -25316 + (NN) -10299 + (LL) 856
1D Compatibility (HY) -21200 + (ID) 4000
Total energy: -155944.0 ( -83.44 by residue)
QMean score : 0.490
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