Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNVFSLLLAREARLLFRRPAELANPLVFFAIVIALFPLAVGPESQLLQTLSPGLVWVAALLAVLLSLEGLFRSDFEDGSMEQWVLSPHPLALLVLAKVLAHWLFSGLALVLMSPLFALMLGLPARCIPVLLLSLLLGTPVLSLLGAVGAALTVGLKRGGLLLALLILPLYIPVLILGSGALQASLQGLPSSGHLLWLASLTALALTLTPFAIAAGLKISVGE |
2LX0 Chain:A ((16-32)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTFLAFGFWLFKYLQKK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2338 for 67 contacts (-34.9/contact) +
2D Compatibility (PS) -1531 + (NN) 1625 + (LL) 17948
1D Compatibility (HY) -400 + (ID) 100
Total energy: 15204.0 ( 226.93 by residue)
QMean score : -0.013
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