Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRTVEDVDMLNHHFRVCSATVYRPPGDGCQSATSQPSAWWMAAKESRSGQLRRVEHVAFEGHPAAVLAGRAVEDRAVVGEADGQAEADVGSVLRGVQLAFEVQLEHARLDAFQADGDVRVVHGLAFAAALLGADGEGHGVSVHVLLQLAWGRRRQRGGQTTGRRAGWPVLAAVGAARGLGIIRRRRSPTAHHQPTPEGMMKLPVLAVLGAALLLSACAKKEAEACASPD-VKDQLMRIFLQGAITERSPEFKDSALRDVAILEKDPDSGVLSCVGTLSVPAGQQVVEGVLQYRIAPVAKSDYDYLLLDTAGANTTALAQRLNKALGQ |
| 1A8Q Chain:A ((112-159)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDAT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3504 for 191 contacts (18.3/contact) +
2D Compatibility (PS) -4857 + (NN) -243 + (LL) 13944
1D Compatibility (HY) -3200 + (ID) 900
Total energy: 8248.0 ( 43.18 by residue)
QMean score : -0.117
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