Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYQRLKGFTDNLELRRRNRATVEHYMRMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRDGIPT
3FF0 Chain:A ((9-162))
-------QGFEDAVELRRKNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELDDGKIKRNREFMNVFQQLRALSIPVPQIKREGIP-
General information:
TITO was launched using:
RESULT:
Template:
3FF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33653 for 1026 contacts (-32.8/contact) +
2D Compatibility (PS) -16678 + (NN) -6816 + (LL) 952
1D Compatibility (HY) -17600 + (ID) 5100
Total energy: -78895.0 ( -76.90 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3FF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FF0-query.scw
PDB file :
Tito_Scwrl_3FF0.pdb
: