Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFDAARYVHRYYASLAPAPGNEYPRLRAWEYLWEYVWDPSRSWDDLTAPEQLDTTALHLG----FYLANWGMF--RGSSGLLQNSNLDLMKALARQLFSGAGPELFELSLVDFAGNGARLAHNRKLLETVLGSMDALSSRVSWTDTLKSKILLGVWGEFPALDRHYVAACRALYPRRGLTSVNGGTLTALHRLIGEERLSFPRLETARKGLLYPTGRLADMAFFQYGLENA |
1MQT Chain:A ((148-228)) | -------------------PGGPVP-TKVNSYSWQTSTNPSVFWTEGNAPPRMSIPFIGIGNAYSMFYDGWARFDKQGTYGI---STLNSMGTLYMRHVNGGGPGPIVSTVRIYFKPKHVKTWVPRPPRLCQYKKAGNVNFIPTSVTEGRTDITTMKTT------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4155 for 294 contacts (14.1/contact) +
2D Compatibility (PS) -7462 + (NN) 2099 + (LL) 7604
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: 2496.0 ( 8.49 by residue)
QMean score : -0.054
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