Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLLIGLIRFYQYAISPLIGPRCRFYPSCSHYTLEAIRVHGALRGGYLGARRLLRCHPWHPGGYDPVPERQEQACACHRTAKPGK
3FDB Chain:A ((137-176))
------------------------------------GINLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARV
General information:
TITO was launched using:
RESULT:
Template:
3FDB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6337 for 181 contacts (-35.0/contact) +
2D Compatibility (PS) -4141 + (NN) -1010 + (LL) 2760
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -11028.0 ( -60.93 by residue)
QMean score : 0.087
(partial model without unconserved sides chains):
PDB file :
Tito_3FDB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FDB-query.scw
PDB file :
Tito_Scwrl_3FDB.pdb
: