Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGSGHEATSTPPRRSHWRWLRRLLTLAFFVLVPVLLFLLVKNLDWQEVRHALGEYRPATLFLGLLLAAAGYTVFSSFDLLSRYYIGHSLPKRRVFTVAFVCNAFNLNLSSWVGAVALRYRLYSRLGLDIADITRILTFSLVTNWFGYLLLAGILFSCGLPALPPGW---KLGSDGLRLIGALLLALAAGYLLACRFARRRAWGWREHRLTLPSWRLAALQGLLGASNWSLMALLLYSLLPHSVDYPSVLAILLISSIAGVITHIPAGLGVLEAVFIALLQGRLSQGVLLAALIGYRVLYFLLPLALACVVYLLLERRAIRLRRKQRRLRQGQA |
| 4E1L Chain:A ((31-98)) | ---------------------------------------------------------------------------------------------------------------QLGTIAVKEAI-SRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNILTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVTAGNASGINDGAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44581 for 368 contacts (-121.1/contact) +
2D Compatibility (PS) -6736 + (NN) -1186 + (LL) 8816
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -48487.0 ( -131.76 by residue)
QMean score : 0.320
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