Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTSYDDTRQHLLDTGYRIMAVKGFSGVGLNEILQSAGVPKGSFYHYFKSKEQFGQALLEDYFRVYLADMDQRFSAPGLNARERLMSYWQKWLDNACPPCDEQRCLVVKLSAEVADLSESMRITLRDGSDGIIERLVGCLGQGRDDGSLAPCDARHMASALYQLWLGASLLSKLHRSPGPLETAMQTTRSLLEI
3RD3 Chain:A ((7-193))
------DTRQHLLDTGYRIMAVKGFSGVGLNEILQSAGVPKGSFYHYFKSKEQFGQALLEDYFRVYLADMDQRFSAPGLNARERLMSYWQKWLDNACPPCDEQRCLVVKLSAEVADLSESMRITLRDGSDGIIERLVGCLGQGRDDGSLAPCDARHMASALYQLWLGASLLSKLHRSPGPLETAMQTTRSLLE-
General information:
TITO was launched using:
RESULT:
Template:
3RD3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95483 for 1348 contacts (-70.8/contact) +
2D Compatibility (PS) -20385 + (NN) -11579 + (LL) 516
1D Compatibility (HY) -26400 + (ID) 9350
Total energy: -162681.0 ( -120.68 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_3RD3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RD3-query.scw
PDB file :
Tito_Scwrl_3RD3.pdb
: