Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAYLSDQPVRLSPLRDEQGNQPRFGLLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVLELVEQEGAEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELELWRRASGRYQRSAAHYSSRSAAPIVERHPRREFPILRFCEPPVEGDASFINPSEFHYDGIAPEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVHIHAEPALRNPHLQRD
3EAT Chain:X ((3-293))
MNAYLSDQPVRLSPLRDEQGNQPRFGLLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVLELVEQEGAEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELELWRRASGRYQR-----SSRSAAPIVERHPRREFPILRFCEP----------PSEFHYDGIAPEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVHIHAEPALRNPHLQRD
General information:
TITO was launched using:
RESULT:
Template:
3EAT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143014 for 2160 contacts (-66.2/contact) +
2D Compatibility (PS) -29120 + (NN) -15367 + (LL) 676
1D Compatibility (HY) -34800 + (ID) 13800
Total energy: -235425.0 ( -108.99 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_3EAT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EAT-query.scw
PDB file :
Tito_Scwrl_3EAT.pdb
: