Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRTDNVIDFARYRSRRQARRLGEMMWAVYAWRAGYAVPQPPARHDERSRRA
3CF4 Chain:A ((659-691))
----------SKYRRALIAKTYEEDKWKVYDARNGQEMPIPPA---------
General information:
TITO was launched using:
RESULT:
Template:
3CF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4681 for 120 contacts (-39.0/contact) +
2D Compatibility (PS) -3060 + (NN) 3189 + (LL) 1168
1D Compatibility (HY) -800 + (ID) 650
Total energy: -4834.0 ( -40.28 by residue)
QMean score : 0.021
(partial model without unconserved sides chains):
PDB file :
Tito_3CF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CF4-query.scw
PDB file :
Tito_Scwrl_3CF4.pdb
: