Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHL----DQGRRANSAPQWAAYPVYPAFRAKNNKVNTFAERLQGCFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVA---PPEGGYSIERGAKVYAAQCAICHGADGQGQM-ALGQTVFPPLWGAQSFNWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERP--QDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
| 4WQC Chain:A ((5-237)) | -------------------------TVALTVPAAALLPDGALGESIVRGRRYLSDTPAQLPDFVGNGLACRHCHPGRDGEVGTEANAAPFVGVVGRFPQYSARHGRLITLEQRIGDCFERSLNGRALALDHPALIDMLAYMSWLSQGVPVGAVVAGHGIPTLTLEREPDGVH----GEALYQARCLACHGADGSGTLDADGRYLFPPLWGPRSFNTGAGMNRQATAAGFIKHNMPL----SLSDEEAWDVAGFVLTHPRPLF--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48824 for 1760 contacts (-27.7/contact) +
2D Compatibility (PS) -23114 + (NN) -12035 + (LL) 3700
1D Compatibility (HY) -13200 + (ID) 4700
Total energy: -98173.0 ( -55.78 by residue)
QMean score : 0.481
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