Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPVAHRLLFSLTALLAATAQAAVDGQKLYTQGGANPAAAACVTCHGADGMGLAAAGFPRLAGLPAAYLSKQLHDLKQGGS--------REHPVMKGIADALGDDEIQALANTLAAMPAPKPVELSRVATPRSPGETLAVRGAWERNIPECVTCHGPAGSGVGEA-FPPLQGQGEMYLSNQLRAWQLGTRRNDPNDL-MGHIAKSLSEEEIRSVSQFFATLGQAGGQP |
| 1ETP Chain:A ((12-189)) | --------------------------------------AVCGACHGVDGNS-PAPNFPKLAGQGERYLLKQLQDIKAGSTPGAPEGVGRKVLEMTGMLDPLSDQDLEDIAAYFSSQKG--SVGYADPALAKQ-GEKLFRGGKLDQGMPACTGCHAPNGVGNDLAGFPKLGGQHAAYTAKQLTDFREGNRTNDGDTMIMRGVAAKLSNKDIEALSSYIQGL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ETP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36216 for 1288 contacts (-28.1/contact) +
2D Compatibility (PS) -18077 + (NN) -8030 + (LL) 2744
1D Compatibility (HY) -9200 + (ID) 3050
Total energy: -71829.0 ( -55.77 by residue)
QMean score : 0.355
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