Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHQRQHFEALAEDLRRHLAEGEDFTLWYSAEDSEFIRFNRARVRQAGRVRQASALLRLIRDERQASLDLTLSGAPEEDRQRLAEGLRQLRQSLAWIPADPYLLLDTSAWQRENQDLGAAPDSGALLASLERRARDLDLVGIYAAGPLFRGFANSWGAFGWHAGSSFNFDWSLFHGNGQAVKADYAGQRWDDEAFARRFEQAREQLGHLGKPLRQLRPGDYRAYLAPAALEEVMQMLCWGGFSARALATGESPLQ-RL--QNGDALLSPLLNLAERPATSPSPAFSAEGSPRAEVELVGNGRLSGRLVSSRSAREYGL--VANGAGANEAPTALDMAGGSLEQARILEALDTGLYIGNLWYLNYSDMPAARLTG-MTRFAT-FWVENGQIRAPVSTMRFDDSLYSFLGAHLEDLSHERELRLSSNTYGERQTDSMHLPGALTGRFTLTL |
1VL4 Chain:A ((206-387)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEEAISLIGS--KTIPSGKYPVLMRNTALLDLMEMFIPM-ISAENVQKNLSPLKGKLGEQVGNPAVS-IKDLPYHPKGLSSTPFDDEGVPTTEKFVLENGVLKTFLHNLKTARKEGVEPTGNGFVGGIRPVNLMLMPGEKSFEELLKEMDRGVVITEVEGMHAG---ANSISGEFSLFAKGYWVENGEI----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43255 for 1184 contacts (-36.5/contact) +
2D Compatibility (PS) -18772 + (NN) -5088 + (LL) 17136
1D Compatibility (HY) -12400 + (ID) 2600
Total energy: -64979.0 ( -54.88 by residue)
QMean score : 0.386
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