Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIENRVFLVTGGSSGLGAATAKMLVEQGGKVVLADINAEAGAAKAAELGAQARFVRADIASEADGRQAVAAALEAFGGLHGLANCAGVAPAEKVLGRNGIHALESFRRVIDINLVGSFNMLRLAAEAMSQGQPDEGGERGVIVNTASVAAFDGQIGQAAYSASKSGVVGMTLPIARELARFGIRVMTIAPGIFETPMMAGMPQEVRDSLGASVPFPPRLGRPDEYAALVRQIIENSMLNGEVIRLDGAIRMAAR
4O5O Chain:A ((9-263))
MQIENRVFLITGAGSGLGAAVSKMAVEAGAKVVLLDVNAEAGEAGAKALGASARFQRTDVASDTDGKAAIAAAIEAFGRIDVLVNCAGVAPGEKVLGREGAHKLETFTRTISINLIGTFNMLRLAAEAMAKNEPGQGGERGVIINTASVAAFDGQIGQAAYSASKGGVAAMTLPVARELARHGIRVMTIAPGIFKTPMMA-----VQDALGASVPFPPRLGEPAEYAALVHHIVENQMLNGEVIRLDGALRMAAK
General information:
TITO was launched using:
RESULT:
Template:
4O5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140264 for 2205 contacts (-63.6/contact) +
2D Compatibility (PS) -27292 + (NN) -10768 + (LL) 120
1D Compatibility (HY) -26800 + (ID) 9350
Total energy: -214354.0 ( -97.21 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_4O5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O5O-query.scw
PDB file :
Tito_Scwrl_4O5O.pdb
: