Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKEIINVVHGTFTQLRSLVMIFGHAFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLVYEKHDLLISGPGKNPDYNYYRVAGMAIAGKPKGAAQNEAEPINVKSLLP
5C4I Chain:B ((259-312))
-----------------------------------------------------------EACTECYTCWIYCPDSCIT----RTEEG---PVF---NMKYCKGCGLCTAVCPSGALTNVPELD-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5C4I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30201 for 304 contacts (-99.3/contact) +
2D Compatibility (PS) -5621 + (NN) -3328 + (LL) 8232
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -36068.0 ( -118.64 by residue)
QMean score : 0.279
(partial model without unconserved sides chains):
PDB file :
Tito_5C4I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5C4I-query.scw
PDB file :
Tito_Scwrl_5C4I.pdb
: