Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSNAQRALIKATVPLLETGGEALITHFYRTMLGEYPEVRPLFNQAHQASGDQPRALANGVLMYARHIDQLQELGPLVAKVVNKHVSLQVLPEHYPIVGTCLLRAIREVLGEQIATDEVLEAWGAAYQQLADLLIEAEESVYAASAQADGGWRGVRRFRVARKQAESEEITSFYLEPVDGQPLLAFQPGQYIGLRLDID--GEEVRRNYSLSAASNGREYRISVKREAG-----GRVSNYLHDRVAEGDELDLFPPAGDF-VLRDSDKPLVLITAGVGITPALAMLQEALPQARP--IRFIHCARHGGVHAFRDWIEDVSAQHEQVEHFFCYSEPRA----GDSADAEGLLSREKL--ADWLPQERDLDAYFLGPRPFMAQVKRHLADLGVPSQQCHYEFFGPAAALDA |
| 3OZU Chain:A ((1-398)) | MLTQKTKDIVKATAPVLAEHGYDIIKCFYQRMFEAHPELKNVFNMAHQEQGQQQQALARAVYAYAENIEDPNSLMAVLKNIANKHASLGVKPEQYPIVGEHLLAAIKEVLGNA-ATDDIISAWAQAYGNLADVLMGMESELYERSAEQPGGWKGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLSDMPNGRSYRISVKREGGGPQPPGYVSNLLHDHVNVGDQVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVAL-QAPPRQVVFVHGARNSAVHAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKSILLP---DADYYICGPIPFMRMQHDALKNLGIHEARIHYEVFGP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228134 for 2936 contacts (-77.7/contact) +
2D Compatibility (PS) -41430 + (NN) -22144 + (LL) 1064
1D Compatibility (HY) -36800 + (ID) 8750
Total energy: -336194.0 ( -114.51 by residue)
QMean score : 0.524
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