Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKTWIYAASAAAIGGALIGGWLLDPAPPEASPQARQSPAAQAAAAPTAALAAPAADATRMLAPTPVTTPAPRERVTLWQGELRSREGAQGIPEYLAQVEPALLDTLALGQVLEMSLPGRERPLQARLASTHNSAGLP---VWRGGLVDGDEAESLTVVRGSLETHINV----ATLDGSYSIIVDNRSGKTRVIDENDIAARSDPHGDHVDAPLAELPPMPPPAQG |
| 2YH2 Chain:A ((48-116)) | ------------------------------------------------------------------------------------------------------------IHRVEDITIPGRGGPIRARVYRPRDGERLPAVVYYHGG----------GFVLGSVETHDHVCRRLANLSGAVVVSVDYR--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10713 for 345 contacts (-31.1/contact) +
2D Compatibility (PS) -6559 + (NN) 524 + (LL) 8968
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -14580.0 ( -42.26 by residue)
QMean score : 0.265
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