Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDVFLDFLLGMVLGCLGGLFGIGGGLLAIPALGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLASSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLGGLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMHGHVDWRMGIPLALGGLLSISWGVRLAHALPERSLRMAFCAFLALCAVLLLVRG |
| 4O7K Chain:A ((15-80)) | -----------------------------------IRRLDKELAQSSGLPLELPQIVPNAW-----NEVVWR----LPVPNHPDAFMTASNAAQSD-------FIVYVNGLAFYRAW------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O7K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26110 for 293 contacts (-89.1/contact) +
2D Compatibility (PS) -6870 + (NN) 3894 + (LL) 12456
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -21430.0 ( -73.14 by residue)
QMean score : -0.104
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