Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLPIPSLLIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLAPAVLHDYEPRLLSPSAVALRETGCSSVAEAAALALAERLGGGRADLLGAKRSDDRASIALARLLTERELP
2W6K Chain:A ((5-142))
-PLPIPSLLIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLAPAVLHDYEPRLLSPSAVALRETGCSSVAEAAALALAERLGGGRADLLGAKRSDDRASIALARLLTER---
General information:
TITO was launched using:
RESULT:
Template:
2W6K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86963 for 1152 contacts (-75.5/contact) +
2D Compatibility (PS) -15135 + (NN) -11220 + (LL) 348
1D Compatibility (HY) -16400 + (ID) 6900
Total energy: -136270.0 ( -118.29 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_2W6K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W6K-query.scw
PDB file :
Tito_Scwrl_2W6K.pdb
: